// SPDX-License-Identifier: BSD-3-Clause // Copyright (c) 2026 Gregory Tucker, ESS ERIC // // Created by Gregory Tucker, ESS ERIC on 2023-06-01. // #include #include #include #include #ifndef CHOPPER_LIB_CHOPPER_LIB_H #include "chopper-lib.h" #endif #ifdef __cplusplus extern "C" { #endif /******************************** range functions ************************************/ int classify_range_overlap(const range * a, const range * b){ // |A A| |B B| ... or ... |B B| |A A| if (a->maximum < b->minimum || b->maximum < a->minimum) return 0; // there should be *some* overlap at this point: if (a->minimum == b->minimum && a->maximum == b->maximum) return 1; // identical // |2| -> B on right end; |3| -> A on right end; (+) -> one inside the other, (-) -> overlapping subregion if (a->minimum <= b->minimum && a->maximum >= b->maximum) return 3; // |A|BB|A| if (b->minimum <= a->minimum && b->maximum >= a->maximum) return 2; // |B|AA|B| if (a->minimum < b->minimum && a->maximum < b->maximum) return -2; // |A|BA|B| if (b->minimum < a->minimum && b->maximum < a->maximum) return -3; // |B|AB|A| return 0; } int compare_ranges(const range * a, const range * b){ if (a->minimum > b->minimum) return 1; if (a->minimum < b->minimum) return -1; return 0; } // This gateway function is used along with qsort, which handles only void pointers /** Order for the sort below: by lower edge, then widest first. * * `compare_ranges` looks only at the lower edge, as its documentation says, so it leaves * ranges that share one in whatever order `qsort` puts them. `qsort` is not stable and * each platform's implementation orders equal elements as it pleases, so a set with tied * lower edges -- which the clamping in `chopper_inverse_velocity_windows` produces in * quantity -- came out ordered differently on different platforms. The merge below is * order-independent now, but the array this leaves sorted is part of what a caller sees, * so break the tie here rather than leave it to the C library. */ static int compare_sorted_ranges(const void * ptr_a, const void * ptr_b){ const range * a = (const range *) ptr_a; const range * b = (const range *) ptr_b; if (a->minimum < b->minimum) return -1; if (a->minimum > b->minimum) return 1; if (a->maximum > b->maximum) return -1; if (a->maximum < b->maximum) return 1; return 0; } /******************************** range_set functions ************************************/ range_set range_set_sort(range_set s){ // An empty set is already sorted, and qsort may not be handed a null pointer even for // nothing to sort. A set with no ranges is ordinary here rather than exceptional: it is // what a chopper admitting no window intersects with, and what a train that passes // nothing carries from there on. if (s.count == 0 || s.ranges == NULL) return s; /* Put every range the right way round, so the merge below can assume it. */ for (unsigned i = 0; i < s.count; ++i) { if (s.ranges[i].maximum < s.ranges[i].minimum) { const double swap = s.ranges[i].minimum; s.ranges[i].minimum = s.ranges[i].maximum; s.ranges[i].maximum = swap; } } qsort(s.ranges, s.count, sizeof(*(s.ranges)), compare_sorted_ranges); /* Merge in one pass, carrying the upper edge of the range being built. * * This used to compare each range against its *neighbour in the input* and assign that * neighbour's upper edge to the range being built. Both halves were wrong. Assigning * loses the extent of a range that contains the one after it -- [1, 10] followed by * [2, 3] came out [1, 3] -- and comparing against the neighbour rather than the running * edge made the answer depend on the order equal lower edges happened to be sorted * into: {[0, 10], [0, 1], [5, 6]} came out [0, 1] [5, 6] one way round and [0, 6] the * other, where the union is [0, 10] either way. That is how a chopper train's admitted * band came out differently on Windows and on Linux. * * A running maximum fixes both, and needs no second pass: whichever way ties are * ordered, the wider range absorbs the narrower. Touching ranges merge as well as * overlapping ones, which is what the documentation promises. * * Merged in place, which the contract allows -- it says the input may be returned -- and * which every caller already handles by comparing the returned pointer against the one * it passed in. */ unsigned kept = 1; for (unsigned i = 1; i < s.count; ++i) { if (s.ranges[i].minimum <= s.ranges[kept - 1].maximum) { if (s.ranges[i].maximum > s.ranges[kept - 1].maximum) { s.ranges[kept - 1].maximum = s.ranges[i].maximum; } } else { s.ranges[kept++] = s.ranges[i]; } } s.count = kept; return s; } static int range_intersects_ranges(const range r, const range_set rs){ for (unsigned i=0; i 0) ++j; if (comp == 0) { printf("This should not be possible"); exit(-1); } } } } // we now know *how many* output sub-ranges there will be, and can allocate the output structure out.ranges = calloc(out.count, sizeof(range)); // and can go through again actually assigning outputs: i = 0; j = 0; unsigned k=0; while (i < a.count && j < b.count){ switch (classify_range_overlap(a.ranges + i, b.ranges + j)) { case -3: { // |B|AB|A|; keep (A[i]min, B[j]max) increment j since A extends to higher value out.ranges[k].minimum = a.ranges[i].minimum; out.ranges[k].maximum = b.ranges[j].maximum; ++j; ++k; break; } case -2: { //|A|BA|B|; keep (B[j]min, A[i]max) increment i since B extends to higher value out.ranges[k].minimum = b.ranges[j].minimum; out.ranges[k].maximum = a.ranges[i].maximum; ++i; ++k; break; } case 1: { // identical, keep either a[i] or b[j] and increment both i & j out.ranges[k].minimum = a.ranges[i].minimum; out.ranges[k].maximum = a.ranges[i].maximum; ++i; ++j; ++k; break; } case 2: { // |B|AA|B|; keep a[i] and increment i out.ranges[k].minimum = a.ranges[i].minimum; out.ranges[k].maximum = a.ranges[i].maximum; ++i; ++k; break; } case 3: { // |A|BB|A|; keep b[j] and increment j out.ranges[k].minimum = b.ranges[j].minimum; out.ranges[k].maximum = b.ranges[j].maximum; ++j; ++k; break; } default: { if (compare_ranges(a.ranges + i, b.ranges + j) < 0) ++i; else ++j; } } } // memory management: (did the sort function make a new range_set?) if (a.ranges != NULL && a.ranges != ain.ranges) free(a.ranges); if (b.ranges != NULL && b.ranges != bin.ranges) free(b.ranges); return out; } /****************** chopper train functionality ************************/ /** When a disk edge at angle `a` is on the beam, ignoring which rotation. * * The angular term is negated because `edges` increase the way NXdisk_chopper measures * them, so a turning disk carries a larger angle *towards* the beam rather than away * from it; and it keeps the sign of `speed`, so reversing the disk places the opening on * the other side of `delay`. `beam` is where the beam crosses the disk, measured from * the same mark the edges are. */ static double chopper_edge_time(const chopper_parameters chopper, const double a) { return chopper.delay + (chopper.beam - a) / 360.0 / chopper.speed; } /** How long before and after those times a beam of finite width is still in the opening. * * An opening is angular and a beam is not. A neutron crossing the disk to one side of the * beam centre meets an edge before or after one crossing at the centre does, by the angle * between them over the rate the disk turns. Half the aperture either side of every edge * time is the whole of it, and it keeps the sign of nothing: a disk turning backwards is * as wide as one turning forwards, so the period, not the signed speed, sets the scale. */ static double chopper_aperture_time(const chopper_parameters chopper) { if (chopper.aperture <= 0 || chopper.speed == 0) return 0.0; return chopper.aperture / 2.0 / 360.0 / fabs(chopper.speed); } /** Whether a disk that is not turning stands open on the beam. * * A parked disk is open or shut for good. The beam crosses it at `beam`, the openings * span `edges` in the same frame, and with no speed there is no period and no delay to * apply: either that angle is inside an opening or it is on the solid part of the disk. * Which one decides whether the disk drops out of a calculation or empties it. */ int chopper_parked_is_open(const chopper_parameters chopper) { if (chopper.edge_count < 2 || chopper.edges == NULL) return 0; for (unsigned i = 0; i + 1 < chopper.edge_count; i += 2) { const double width = chopper.edges[i + 1] - chopper.edges[i]; // measured from this opening's first edge, so an opening written across the mark -- // {350, 370} -- needs no special case, and neither does a negative `beam` double from_edge = fmod(chopper.beam - chopper.edges[i], 360.0); if (from_edge < 0) from_edge += 360.0; if (from_edge < width) return 1; } return 0; } /** Name the disk that emptied the answer. * * A disk parked shut is a beam stop, and the answer either function can give for one is * empty -- the same answer an over-constrained train gives, and the same one a disk with * no openings gives. An empty range set says nothing about which disk emptied it, and a * disk parked shut is nearly always one left mis-set rather than the question being * asked, so say which one it was and why. */ static void chopper_report_parked_shut(const chopper_parameters chopper, const unsigned index) { printf("chopper-lib: nothing gets through chopper %u, parked with the beam at %g " "degrees, where the disk is solid; the train admits nothing.\n", index, chopper.beam); } range_set chopper_inverse_velocity_windows(const unsigned count, const chopper_parameters * choppers, const double inv_v_min, const double inv_v_max, const double latest_emission){ range_set limits; limits.count = 1; limits.ranges = calloc(1, sizeof(range)); limits.ranges[0].minimum = inv_v_min; limits.ranges[0].maximum = inv_v_max; for (unsigned i=0; i n_max) n_max = n_j_max; if (first) first = 0; } // collect the ranges for each of the n in (n_min, n_max) into a set: const unsigned rotation_count = (unsigned)(n_max - n_min + 1); range_set ith; // every rotation can contribute one range per opening, so there has to be room for all of them ith.count = rotation_count * opening_count; ith.ranges = ith.count ? calloc(ith.count, sizeof(range)) : NULL; if (ith.count && ith.ranges == NULL) { printf("Out of memory\n"); exit(-1); } unsigned c=0; for (unsigned j=0; j < rotation_count; ++j) { const double n_tau = tau * (double) (n_min + (int) j); for (unsigned opening=0; opening inv_v_max ? inv_v_max : wiv_min; wiv_max = wiv_max < inv_v_min ? inv_v_min : wiv_max > inv_v_max ? inv_v_max : wiv_max; // and insert if this is a valid range: if (wiv_min < wiv_max) { ith.ranges[c].minimum = wiv_min; ith.ranges[c++].maximum = wiv_max; } } } ith.count = c; // clean up allocated opening and closing times free(t_open); free(t_close); // find the intersection of this chopper with the running set const range_set new_limits = range_intersection(limits, ith); // clean-up allocated memory, ensuring limits or ith is not erased if transferred to new_limits: if ((!new_limits.count || new_limits.ranges != limits.ranges) && limits.ranges) free(limits.ranges); if ((!new_limits.count || new_limits.ranges != ith.ranges) && ith.ranges) free(ith.ranges); limits = new_limits; } return limits; } unsigned chopper_inverse_velocity_limits(double * lower, double * upper, const unsigned count, const chopper_parameters * choppers, const double inv_v_min, const double inv_v_max, const double latest_emission){ const range_set limits = chopper_inverse_velocity_windows(count, choppers, inv_v_min, inv_v_max, latest_emission); if (limits.count){ *lower = limits.ranges[0].minimum; *upper = limits.ranges[limits.count-1].maximum; } if (limits.ranges) free(limits.ranges); return limits.count; } // V2K, K2V and PI come from whatever is compiling this. McStas defines all three in // its runtime, and this file is copied verbatim into every instrument that // %includes it, so defining them here would put a second definition of PI in the // generated C. Every other build passes them in instead -- CMake does it with // CHOPPER_LIB_DEFINITIONS, which the README spells out for a consumer that compiles // this source into a target of its own rather than linking the library. #if !defined(V2K) || !defined(K2V) || !defined(PI) #error "chopper-lib.c needs V2K, K2V and PI defined; build it with CHOPPER_LIB_DEFINITIONS or inside McStas" #endif unsigned chopper_wavelength_limits(double * lower, double * upper, const unsigned count, const chopper_parameters * choppers, const double lambda_min, const double lambda_max, const double latest_emission){ const unsigned windows = chopper_inverse_velocity_limits( lower, upper, count, choppers, lambda_min * V2K / 2 / PI, lambda_max * V2K / 2 / PI, latest_emission); if (windows) { *lower *= K2V * 2 * PI; *upper *= K2V * 2 * PI; } return windows; } static int_range chopper_rotation_limits(const chopper_parameters chopper, const range time_range) { int_range rotations = {.minimum = 1, .maximum = -1}; if (chopper.edge_count < 2 || chopper.edges == NULL) { return rotations; } // The edges increase, so the disk's angular extent is its first and its last -- which // is the one simplification the flat array buys outright over a list of pairs. const range edges_range = {.minimum = chopper.edges[0], .maximum = chopper.edges[chopper.edge_count - 1]}; // An edge at angle a is on the beam at chopper_edge_time(a), and every period // thereafter, so the rotation index of a time t is (t - edge_time) / tau. Both terms // must be in rotations: dividing the elapsed time by the period is what converts it, // and the period is positive however the disk turns. const double tau = 1.0 / fabs(chopper.speed); const double t0 = chopper.delay; // Convert the disk's angular extent to fractional rotations, keeping the pair ordered: // reversing the disk exchanges which edge is the earlier one. double lowest = (chopper_edge_time(chopper, edges_range.maximum) - t0) / tau; double highest = (chopper_edge_time(chopper, edges_range.minimum) - t0) / tau; if (lowest > highest) { const double tmp = lowest; lowest = highest; highest = tmp; } // a beam of finite width opens the disk earlier and closes it later, in the same // rotations, so the extent it can cover is that much wider at both ends const double aperture = chopper_aperture_time(chopper) / tau; lowest -= aperture; highest += aperture; // find the number of rotations needed to place the latest angle _before_ the earliest time: rotations.minimum = (int) floor((time_range.minimum - t0) / tau - highest) - 1; // and the number of rotations needed to place the earliest angle _after_ the latest time: rotations.maximum = (int) ceil((time_range.maximum - t0) / tau - lowest) + 1; return rotations; } unsigned chopper_inverse_velocity_time_mask( int *mask, const unsigned mask_inverse_velocity_count, const unsigned mask_time_count, const double *inverse_velocities, const unsigned inverse_velocity_count, const double *times, const unsigned time_count, const chopper_parameters *choppers, const unsigned chopper_count, const int grow_mask ) { unsigned allowed_bins = 0; if (mask_inverse_velocity_count != inverse_velocity_count - 1 || mask_time_count != time_count - 1) { printf("Mask dimensions do not match the provided inverse velocity and time arrays\n"); exit(-1); } // Initialize the edges for bin edge checks const unsigned inverse_velocity_edges_count = inverse_velocity_count * mask_time_count; const unsigned time_edges_count = mask_inverse_velocity_count * time_count; int * inverse_velocity_edges = calloc(inverse_velocity_edges_count, sizeof(int)); if (inverse_velocity_edges == NULL) { printf("Out of memory\n"); exit(-1); } int * time_edges = calloc(time_edges_count, sizeof(int)); if (time_edges == NULL) { printf("Out of memory\n"); exit(-1); } for (unsigned i = 0; i < inverse_velocity_edges_count; ++i) inverse_velocity_edges[i] = 1; for (unsigned i = 0; i < time_edges_count; ++i) time_edges[i] = 1; for (unsigned ci = 0; ci < chopper_count; ++ci) { // A stationary disk has no period to speak of; the window functions skip one parked // open rather than dividing by zero, so do the same here. One parked shut takes the // beam stop path below, which is what it is. if (choppers[ci].speed == 0.0) { if (chopper_parked_is_open(choppers[ci])) continue; chopper_report_parked_shut(choppers[ci], ci); memset(inverse_velocity_edges, 0, inverse_velocity_edges_count * sizeof(int)); memset(time_edges, 0, time_edges_count * sizeof(int)); break; // nothing any other chopper does can let a neutron back through } // A disk with no openings is a beam stop rather than an absent chopper, which is what // the window functions report for the same chopper: their range set comes back empty. if (choppers[ci].edge_count < 2 || choppers[ci].edges == NULL) { memset(inverse_velocity_edges, 0, inverse_velocity_edges_count * sizeof(int)); memset(time_edges, 0, time_edges_count * sizeof(int)); break; // nothing any other chopper does can let a neutron back through } const double tau = 1.0 / fabs(choppers[ci].speed); const double aperture = chopper_aperture_time(choppers[ci]); const range time_range = { .minimum = times[0] + choppers[ci].path * inverse_velocities[0], .maximum = times[time_count - 1] + choppers[ci].path * inverse_velocities[inverse_velocity_count - 1] }; const int_range rotations = chopper_rotation_limits(choppers[ci], time_range); if (rotations.maximum < rotations.minimum) continue; // No possible rotations // build the ranges of allowed times for this chopper range_set allowed_times; const unsigned opening_count = choppers[ci].edge_count / 2; allowed_times.count = (rotations.maximum - rotations.minimum + 1) * opening_count; allowed_times.ranges = calloc(allowed_times.count, sizeof(range)); unsigned c = 0; for (int n = rotations.minimum; n <= rotations.maximum; ++n) { for (unsigned w = 0; w < opening_count; ++w) { // Which edge of an opening reaches the beam first depends on which way the disk // turns, so place both and order the pair afterwards. const double a = (double) n * tau + chopper_edge_time(choppers[ci], choppers[ci].edges[2 * w]); const double b = (double) n * tau + chopper_edge_time(choppers[ci], choppers[ci].edges[2 * w + 1]); // widened by the beam's own width, which is why this is not the same as growing // the finished mask: it opens the window in time and leaves the velocities alone allowed_times.ranges[c].minimum = (a < b ? a : b) - aperture; allowed_times.ranges[c++].maximum = (a < b ? b : a) + aperture; } } // Now check each bin edge against the allowed times for (unsigned ti = 0; ti < time_count; ++ti) { for (unsigned vi = 0; vi < mask_inverse_velocity_count; ++ vi) { if (time_edges[ti * mask_inverse_velocity_count + vi] == 1) { const range edge= { .minimum = times[ti] + choppers[ci].path * inverse_velocities[vi], .maximum = times[ti] + choppers[ci].path * inverse_velocities[vi + 1] }; if (range_intersects_ranges(edge, allowed_times) == 0) { time_edges[ti * mask_inverse_velocity_count + vi] = 0; } } } } for (unsigned vi = 0; vi < inverse_velocity_count; ++vi) { for (unsigned ti = 0; ti < mask_time_count; ++ti) { if (inverse_velocity_edges[vi * mask_time_count + ti] == 1) { const range edge = { .minimum = times[ti] + choppers[ci].path * inverse_velocities[vi], .maximum = times[ti + 1] + choppers[ci].path * inverse_velocities[vi] }; if (range_intersects_ranges(edge, allowed_times) == 0) { inverse_velocity_edges[vi * mask_time_count + ti] = 0; } } } } // end of this chopper free(allowed_times.ranges); } // go through the edges and mark bins which are disallowed for (unsigned ti = 0; ti < mask_time_count; ++ti) { for (unsigned vi = 0; vi < mask_inverse_velocity_count; ++vi) { const unsigned index = ti * mask_inverse_velocity_count + vi; if (inverse_velocity_edges[vi * mask_time_count + ti] == 0 && inverse_velocity_edges[(vi + 1) * mask_time_count + ti] == 0 && time_edges[ti * mask_inverse_velocity_count + vi] == 0 && time_edges[(ti + 1) * mask_inverse_velocity_count + vi] == 0) { if (mask != NULL) mask[index] = CHOPPER_MASK_EXCLUDED; } else { if (mask != NULL) mask[index] = CHOPPER_MASK_INCLUDED; ++allowed_bins; } } } // Optionally grow the mask in each direction by the number of grow_mask specified if (grow_mask && mask != NULL) { for (unsigned ti = 0; ti < mask_time_count; ++ti) { for (unsigned vi = 0; vi < mask_inverse_velocity_count; ++vi) { const unsigned index = ti * mask_inverse_velocity_count + vi; if (mask[index] == CHOPPER_MASK_EXCLUDED) { int surround = 0; // Check the surrounding bins for (int dt = -grow_mask; dt <= grow_mask; ++dt) { for (int dv = -grow_mask; dv <= grow_mask; ++dv) { if (dt == 0 && dv == 0) continue; // Skip the center const int nti = (int)ti + dt; const int nvi = (int)vi + dv; if (nti >= 0 && nti < (int)mask_time_count && nvi >= 0 && nvi < (int)mask_inverse_velocity_count) { if (mask[nti * mask_inverse_velocity_count + nvi] == CHOPPER_MASK_INCLUDED) { surround = 1; break; } } } } if (surround) { mask[index] = CHOPPER_MASK_GROWN; ++allowed_bins; } } } } // Now ensure all grown bins are set to allowed (1) for (unsigned ti = 0; ti < mask_time_count; ++ti) { for (unsigned vi = 0; vi < mask_inverse_velocity_count; ++vi) { const unsigned index = ti * mask_inverse_velocity_count + vi; if (mask[index] == CHOPPER_MASK_GROWN) { mask[index] = CHOPPER_MASK_INCLUDED; } } } } free(inverse_velocity_edges); free(time_edges); return allowed_bins; } double chopper_unmasked_probability( const double * signal, const int * mask, const unsigned mask_inverse_velocity_count, const unsigned mask_time_count ) { double unmasked_signal = 0.0; double total_signal = 0.0; for (unsigned ti = 0; ti < mask_time_count; ++ti) { for (unsigned vi = 0; vi < mask_inverse_velocity_count; ++vi) { const unsigned index = ti * mask_inverse_velocity_count + vi; const double bin_signal = signal[index]; total_signal += bin_signal; if (mask[index] == CHOPPER_MASK_INCLUDED) { unmasked_signal += bin_signal; } } } return total_signal ? unmasked_signal / total_signal : 0.0; } /*************************** mask sampling ******************************************/ /* How much of [low, high] lies inside [limit_low, limit_high]; never negative. */ static double chopper_clipped_width( const double low, const double high, const double limit_low, const double limit_high ) { const double lo = low > limit_low ? low : limit_low; const double hi = high < limit_high ? high : limit_high; return hi > lo ? hi - lo : 0.0; } void chopper_mask_sampler_empty(chopper_mask_sampler * sampler) { if (sampler == NULL) return; sampler->count = 0; sampler->acceptance = 0.0; sampler->cumulative = NULL; sampler->inverse_velocity_low = NULL; sampler->inverse_velocity_width = NULL; sampler->time_low = NULL; sampler->time_width = NULL; } chopper_mask_sampler chopper_mask_sampler_make( const int * mask, const unsigned mask_inverse_velocity_count, const unsigned mask_time_count, const double * inverse_velocities, const double * times, const double inverse_velocity_minimum, const double inverse_velocity_range, const double time_minimum, const double time_range ) { chopper_mask_sampler sampler; chopper_mask_sampler_empty(&sampler); if (mask == NULL || inverse_velocities == NULL || times == NULL) return sampler; if (mask_inverse_velocity_count == 0 || mask_time_count == 0) return sampler; if (inverse_velocity_range <= 0.0 || time_range <= 0.0) { printf("A mask sampler needs a region to sample: given %g s/m by %g s\n", inverse_velocity_range, time_range); return sampler; } const double inverse_velocity_maximum = inverse_velocity_minimum + inverse_velocity_range; const double time_maximum = time_minimum + time_range; /* A cell partly outside the sampled region contributes only the part inside it, and one * wholly outside contributes nothing and is left out of the sampler entirely. */ unsigned allowed = 0; for (unsigned ti = 0; ti < mask_time_count; ++ti) { const double dt = chopper_clipped_width(times[ti], times[ti + 1], time_minimum, time_maximum); if (dt <= 0.0) continue; for (unsigned vi = 0; vi < mask_inverse_velocity_count; ++vi) { if (mask[ti * mask_inverse_velocity_count + vi] == CHOPPER_MASK_EXCLUDED) continue; if (chopper_clipped_width(inverse_velocities[vi], inverse_velocities[vi + 1], inverse_velocity_minimum, inverse_velocity_maximum) > 0.0) { ++allowed; } } } if (allowed == 0) return sampler; sampler.cumulative = calloc(allowed, sizeof(double)); sampler.inverse_velocity_low = calloc(allowed, sizeof(double)); sampler.inverse_velocity_width = calloc(allowed, sizeof(double)); sampler.time_low = calloc(allowed, sizeof(double)); sampler.time_width = calloc(allowed, sizeof(double)); if (sampler.cumulative == NULL || sampler.inverse_velocity_low == NULL || sampler.inverse_velocity_width == NULL || sampler.time_low == NULL || sampler.time_width == NULL) { printf("Out of memory building a mask sampler over %u cells\n", allowed); chopper_mask_sampler_free(&sampler); return sampler; } double area = 0.0; unsigned c = 0; for (unsigned ti = 0; ti < mask_time_count; ++ti) { const double t_low = times[ti] > time_minimum ? times[ti] : time_minimum; const double dt = chopper_clipped_width(times[ti], times[ti + 1], time_minimum, time_maximum); if (dt <= 0.0) continue; for (unsigned vi = 0; vi < mask_inverse_velocity_count; ++vi) { if (mask[ti * mask_inverse_velocity_count + vi] == CHOPPER_MASK_EXCLUDED) continue; const double dv = chopper_clipped_width(inverse_velocities[vi], inverse_velocities[vi + 1], inverse_velocity_minimum, inverse_velocity_maximum); if (dv <= 0.0) continue; sampler.inverse_velocity_low[c] = inverse_velocities[vi] > inverse_velocity_minimum ? inverse_velocities[vi] : inverse_velocity_minimum; sampler.inverse_velocity_width[c] = dv; sampler.time_low[c] = t_low; sampler.time_width[c] = dt; area += dv * dt; sampler.cumulative[c] = area; ++c; } } sampler.count = c; sampler.acceptance = area / (inverse_velocity_range * time_range); /* Normalise the running area into a distribution, and pin the last entry rather than * leave a draw above it to fall off the end of a binary search. */ for (unsigned i = 0; i < sampler.count; ++i) sampler.cumulative[i] /= area; sampler.cumulative[sampler.count - 1] = 1.0; return sampler; } void chopper_mask_sampler_free(chopper_mask_sampler * sampler) { if (sampler == NULL) return; if (sampler->cumulative) free(sampler->cumulative); if (sampler->inverse_velocity_low) free(sampler->inverse_velocity_low); if (sampler->inverse_velocity_width) free(sampler->inverse_velocity_width); if (sampler->time_low) free(sampler->time_low); if (sampler->time_width) free(sampler->time_width); chopper_mask_sampler_empty(sampler); } /* Unconditional, as McCode's own libraries write it. Whether this is callable from a kernel * must not rest on the compiler happening to define __GNUC__, which NVHPC does only for * glibc's benefit. MSVC warns on the unknown pragma; the generated instrument silences 4068 * the same way. */ #ifdef _MSC_EXTENSIONS #pragma warning(disable: 4068) #endif #pragma acc routine seq void chopper_mask_sampler_draw( const chopper_mask_sampler * sampler, const double cell_deviate, const double inverse_velocity_deviate, const double time_deviate, double * inverse_velocity, double * time ) { if (sampler == NULL || sampler->count == 0) return; /* The first cell whose cumulative share reaches the deviate. */ unsigned low = 0, high = sampler->count - 1; while (low < high) { const unsigned mid = low + (high - low) / 2; if (sampler->cumulative[mid] <= cell_deviate) low = mid + 1; else high = mid; } if (inverse_velocity != NULL) { *inverse_velocity = sampler->inverse_velocity_low[low] + sampler->inverse_velocity_width[low] * inverse_velocity_deviate; } if (time != NULL) { *time = sampler->time_low[low] + sampler->time_width[low] * time_deviate; } } /*************************** transmitted phase space *********************************/ chopper_polygon chopper_polygon_rectangle(const double inverse_velocity_minimum, const double inverse_velocity_range, const double time_minimum, const double time_range) { chopper_polygon polygon; polygon.count = 0; if (inverse_velocity_range <= 0.0 || time_range <= 0.0) return polygon; const double a0 = inverse_velocity_minimum, a1 = inverse_velocity_minimum + inverse_velocity_range; const double t0 = time_minimum, t1 = time_minimum + time_range; polygon.vertex[0].inverse_velocity = a0; polygon.vertex[0].time = t0; polygon.vertex[1].inverse_velocity = a1; polygon.vertex[1].time = t0; polygon.vertex[2].inverse_velocity = a1; polygon.vertex[2].time = t1; polygon.vertex[3].inverse_velocity = a0; polygon.vertex[3].time = t1; polygon.count = 4; return polygon; } double chopper_polygon_area(const chopper_polygon * polygon) { if (polygon == NULL || polygon->count < 3) return 0.0; double twice = 0.0; for (unsigned i = 0; i < polygon->count; ++i) { const chopper_point p = polygon->vertex[i]; const chopper_point q = polygon->vertex[(i + 1) % polygon->count]; twice += p.inverse_velocity * q.time - q.inverse_velocity * p.time; } return fabs(twice) / 2.0; } void chopper_polygon_extent(const chopper_polygon * polygon, const double alpha, const double beta, double * lower, double * upper) { if (polygon == NULL || polygon->count == 0) return; double lo = alpha * polygon->vertex[0].inverse_velocity + beta * polygon->vertex[0].time; double hi = lo; for (unsigned i = 1; i < polygon->count; ++i) { const double v = alpha * polygon->vertex[i].inverse_velocity + beta * polygon->vertex[i].time; if (v < lo) lo = v; if (v > hi) hi = v; } if (lower != NULL) *lower = lo; if (upper != NULL) *upper = hi; } int chopper_polygon_clip_halfplane(chopper_polygon * polygon, const double alpha, const double beta, const double c) { if (polygon == NULL) return 1; if (polygon->count < 3) { polygon->count = 0; return 1; } chopper_polygon out; out.count = 0; for (unsigned i = 0; i < polygon->count; ++i) { const chopper_point p = polygon->vertex[i]; const chopper_point q = polygon->vertex[(i + 1) % polygon->count]; const double dp = alpha * p.inverse_velocity + beta * p.time - c; const double dq = alpha * q.inverse_velocity + beta * q.time - c; if (dp <= 0.0) { if (out.count >= CHOPPER_POLYGON_MAX_VERTICES) return 0; out.vertex[out.count++] = p; } /* The crossing point is a vertex of the result only when the two ends are strictly on * opposite sides. A vertex lying *in* the line is already emitted by the test above -- * counting it as a crossing too would add it twice, and duplicates eat the vertex * budget that CHOPPER_POLYGON_MAX_VERTICES is sized against. */ if ((dp < 0.0 && dq > 0.0) || (dp > 0.0 && dq < 0.0)) { if (out.count >= CHOPPER_POLYGON_MAX_VERTICES) return 0; const double f = dp / (dp - dq); out.vertex[out.count].inverse_velocity = p.inverse_velocity + f * (q.inverse_velocity - p.inverse_velocity); out.vertex[out.count].time = p.time + f * (q.time - p.time); ++out.count; } } if (out.count < 3) out.count = 0; *polygon = out; return 1; } int chopper_polygon_clip_wedge(chopper_polygon * polygon, const double shortest_path, const double longest_path, const double beta, const double lower, const double upper) { /* The earliest a neutron can arrive must not be after the window shuts, and the latest * must not be before it opens. */ if (!chopper_polygon_clip_halfplane(polygon, shortest_path, beta, upper)) return 0; if (polygon->count == 0) return 1; if (!chopper_polygon_clip_halfplane(polygon, -longest_path, -beta, -lower)) return 0; return 1; } chopper_polygon_set chopper_polygon_set_empty(void) { chopper_polygon_set set; set.count = 0; set.capacity = 0; set.polygon = NULL; return set; } /** Whether a polygon carries no phase space worth keeping. * * Against its own bounding box, so the test means the same thing whatever units the * caller works in. See CHOPPER_POLYGON_AREA_TOLERANCE. */ static int chopper_polygon_is_negligible(const chopper_polygon * polygon) { if (polygon == NULL || polygon->count < 3) return 1; double a_lo = 0, a_hi = 0, t_lo = 0, t_hi = 0; chopper_polygon_extent(polygon, 1.0, 0.0, &a_lo, &a_hi); chopper_polygon_extent(polygon, 0.0, 1.0, &t_lo, &t_hi); const double box = (a_hi - a_lo) * (t_hi - t_lo); if (!(box > 0.0)) return 1; return chopper_polygon_area(polygon) <= CHOPPER_POLYGON_AREA_TOLERANCE * box; } int chopper_polygon_set_add(chopper_polygon_set * set, const chopper_polygon * polygon) { if (set == NULL) return 0; if (chopper_polygon_is_negligible(polygon)) return 1; if (set->count == set->capacity) { const unsigned capacity = set->capacity ? 2 * set->capacity : 8; chopper_polygon * grown = (chopper_polygon *) realloc(set->polygon, capacity * sizeof(chopper_polygon)); if (grown == NULL) { printf("Out of memory holding %u transmitted polygons\n", capacity); return 0; } set->polygon = grown; set->capacity = capacity; } set->polygon[set->count++] = *polygon; return 1; } void chopper_polygon_set_free(chopper_polygon_set * set) { if (set == NULL) return; if (set->polygon) free(set->polygon); *set = chopper_polygon_set_empty(); } double chopper_polygon_set_area(const chopper_polygon_set * set) { if (set == NULL) return 0.0; double total = 0.0; for (unsigned i = 0; i < set->count; ++i) total += chopper_polygon_area(&set->polygon[i]); return total; } /** The two edge times of one opening, ordered, widened by the beam's own width. */ static void chopper_opening_times(const chopper_parameters chopper, const unsigned opening, double * lower, double * upper) { double lo = chopper_edge_time(chopper, chopper.edges[2 * opening]); double hi = chopper_edge_time(chopper, chopper.edges[2 * opening + 1]); if (hi < lo) { const double swap = lo; lo = hi; hi = swap; } const double aperture = chopper_aperture_time(chopper); *lower = lo - aperture; *upper = hi + aperture; } int chopper_polygon_set_transmit(chopper_polygon_set * set, const chopper_parameters chopper, const double path_spread) { if (set == NULL) return 0; if (chopper.edge_count < 2 || chopper.edges == NULL) { /* No openings at all is a beam stop, the same as one parked shut. */ chopper_polygon_set_free(set); return 1; } if (chopper.speed == 0.0) { if (chopper_parked_is_open(chopper)) return 1; printf("chopper-lib: nothing gets through a chopper parked with the beam at %g " "degrees, where the disk is solid; the train transmits nothing.\n", chopper.beam); chopper_polygon_set_free(set); return 1; } if (path_spread < 0.0) { printf("A path spread is a length, so it has no sign; given %g m\n", path_spread); chopper_polygon_set_free(set); return 0; } const double tau = 1.0 / fabs(chopper.speed); const unsigned opening_count = chopper.edge_count / 2; const double shortest_path = chopper.path; const double longest_path = chopper.path + path_spread; /* A spread wide enough to reach from one turn into the next stops the pieces being * disjoint, and then areas double-count. Test it against the slowest neutron present. */ if (path_spread > 0.0 && set->count) { double inverse_velocity_maximum = 0.0; for (unsigned i = 0; i < set->count; ++i) { double high = 0.0; chopper_polygon_extent(&set->polygon[i], 1.0, 0.0, NULL, &high); if (high > inverse_velocity_maximum) inverse_velocity_maximum = high; } for (unsigned w = 0; w < opening_count; ++w) { double lo = 0, hi = 0; chopper_opening_times(chopper, w, &lo, &hi); if (hi - lo >= tau) continue; /* never shut, so nothing to overlap into */ if (path_spread * inverse_velocity_maximum >= tau - (hi - lo)) { printf("A path spread of %g m reaches from one turn of this chopper into the next " "for an inverse velocity of %g s/m; the transmitted pieces would overlap " "and their areas would count twice. Narrow the inverse velocity range or " "the spread.\n", path_spread, inverse_velocity_maximum); chopper_polygon_set_free(set); return 0; } } } chopper_polygon_set out = chopper_polygon_set_empty(); for (unsigned i = 0; i < set->count; ++i) { /* The earliest and latest this polygon can reach the disk: the near path bounds the * first and the far path the second. */ double u_min = 0.0, u_max = 0.0, ignored = 0.0; chopper_polygon_extent(&set->polygon[i], shortest_path, 1.0, &u_min, &ignored); chopper_polygon_extent(&set->polygon[i], longest_path, 1.0, &ignored, &u_max); for (unsigned w = 0; w < opening_count; ++w) { double lo = 0, hi = 0; chopper_opening_times(chopper, w, &lo, &hi); /* Each failure below unwinds by hand rather than jumping to one exit. This file is * copied verbatim into a McStas instrument beside every other library the * instrument includes, and while a label cannot collide with another function's * label -- labels have function scope -- it can be eaten by a macro. Anything that * defines `failed` would rewrite both the label and the jumps to it, which is the * same way `PI` bites a caller that defines its own. Three lines, three times. */ if (hi - lo >= tau) { /* Open for at least a whole turn: it constrains nothing, like one parked open. */ if (!chopper_polygon_set_add(&out, &set->polygon[i])) { chopper_polygon_set_free(&out); chopper_polygon_set_free(set); return 0; } continue; } const long first = (long) floor((u_min - hi) / tau); const long last = (long) ceil((u_max - lo) / tau); for (long n = first; n <= last; ++n) { chopper_polygon piece = set->polygon[i]; if (!chopper_polygon_clip_wedge(&piece, shortest_path, longest_path, 1.0, lo + (double) n * tau, hi + (double) n * tau)) { printf("A transmitted polygon needs more than %d vertices; raise " "CHOPPER_POLYGON_MAX_VERTICES\n", CHOPPER_POLYGON_MAX_VERTICES); chopper_polygon_set_free(&out); chopper_polygon_set_free(set); return 0; } if (!chopper_polygon_set_add(&out, &piece)) { chopper_polygon_set_free(&out); chopper_polygon_set_free(set); return 0; } } } } chopper_polygon_set_free(set); *set = out; return 1; } int chopper_polygon_set_transmit_train(chopper_polygon_set * set, const unsigned count, const chopper_parameters * choppers, const double * path_spreads) { if (set == NULL || (count && choppers == NULL)) return 0; for (unsigned i = 0; i < count && set->count; ++i) { if (!chopper_polygon_set_transmit(set, choppers[i], path_spreads ? path_spreads[i] : 0.0)) return 0; } return 1; } range_set chopper_polygon_set_inverse_velocity_ranges(const chopper_polygon_set * set) { range_set ranges; ranges.count = 0; ranges.ranges = NULL; if (set == NULL || set->count == 0) return ranges; ranges.ranges = (range *) calloc(set->count, sizeof(range)); if (ranges.ranges == NULL) { printf("Out of memory projecting %u polygons\n", set->count); return ranges; } for (unsigned i = 0; i < set->count; ++i) { chopper_polygon_extent(&set->polygon[i], 1.0, 0.0, &ranges.ranges[i].minimum, &ranges.ranges[i].maximum); } ranges.count = set->count; /* Sorts in place and merges what overlaps or touches; may return the input. */ const range_set merged = range_set_sort(ranges); if (merged.ranges != ranges.ranges && ranges.ranges) free(ranges.ranges); return merged; } #pragma acc routine seq int chopper_polygon_contains(const chopper_polygon * polygon, const double inverse_velocity, const double time) { if (polygon == NULL || polygon->count < 3) return 0; /* Convex, so an inside point is on the same side of every edge. Collecting both signs * rather than comparing against the first lets a collinear edge -- cross exactly zero, * which a point on the boundary gives -- count as neither. */ int positive = 0, negative = 0; for (unsigned i = 0; i < polygon->count; ++i) { const chopper_point p = polygon->vertex[i]; const chopper_point q = polygon->vertex[(i + 1) % polygon->count]; const double cross = (q.inverse_velocity - p.inverse_velocity) * (time - p.time) - (q.time - p.time) * (inverse_velocity - p.inverse_velocity); if (cross > 0.0) positive = 1; if (cross < 0.0) negative = 1; if (positive && negative) return 0; } return 1; } #pragma acc routine seq int chopper_polygon_set_contains(const chopper_polygon_set * set, const double inverse_velocity, const double time) { if (set == NULL) return 0; for (unsigned i = 0; i < set->count; ++i) { if (chopper_polygon_contains(&set->polygon[i], inverse_velocity, time)) return 1; } return 0; } void chopper_polygon_sampler_empty(chopper_polygon_sampler * sampler) { if (sampler == NULL) return; sampler->count = 0; sampler->acceptance = 0.0; sampler->cumulative = NULL; sampler->origin = NULL; sampler->edge_a = NULL; sampler->edge_b = NULL; } void chopper_polygon_sampler_free(chopper_polygon_sampler * sampler) { if (sampler == NULL) return; if (sampler->cumulative) free(sampler->cumulative); if (sampler->origin) free(sampler->origin); if (sampler->edge_a) free(sampler->edge_a); if (sampler->edge_b) free(sampler->edge_b); chopper_polygon_sampler_empty(sampler); } chopper_polygon_sampler chopper_polygon_sampler_make(const chopper_polygon_set * set, const double sampled_area) { chopper_polygon_sampler sampler; chopper_polygon_sampler_empty(&sampler); if (set == NULL || set->count == 0 || !(sampled_area > 0.0)) return sampler; unsigned triangles = 0; for (unsigned i = 0; i < set->count; ++i) { if (set->polygon[i].count >= 3) triangles += set->polygon[i].count - 2; } if (triangles == 0) return sampler; sampler.cumulative = (double *) calloc(triangles, sizeof(double)); sampler.origin = (chopper_point *) calloc(triangles, sizeof(chopper_point)); sampler.edge_a = (chopper_point *) calloc(triangles, sizeof(chopper_point)); sampler.edge_b = (chopper_point *) calloc(triangles, sizeof(chopper_point)); if (sampler.cumulative == NULL || sampler.origin == NULL || sampler.edge_a == NULL || sampler.edge_b == NULL) { printf("Out of memory building a sampler over %u triangles\n", triangles); chopper_polygon_sampler_free(&sampler); return sampler; } /* Fan each polygon from its first vertex. Convex, so every fan triangle is inside it. */ double total = 0.0; unsigned t = 0; for (unsigned i = 0; i < set->count; ++i) { const chopper_polygon * polygon = &set->polygon[i]; if (polygon->count < 3) continue; const chopper_point origin = polygon->vertex[0]; for (unsigned v = 1; v + 1 < polygon->count; ++v) { const chopper_point a = polygon->vertex[v], b = polygon->vertex[v + 1]; sampler.origin[t] = origin; sampler.edge_a[t].inverse_velocity = a.inverse_velocity - origin.inverse_velocity; sampler.edge_a[t].time = a.time - origin.time; sampler.edge_b[t].inverse_velocity = b.inverse_velocity - origin.inverse_velocity; sampler.edge_b[t].time = b.time - origin.time; total += fabs(sampler.edge_a[t].inverse_velocity * sampler.edge_b[t].time - sampler.edge_b[t].inverse_velocity * sampler.edge_a[t].time) / 2.0; sampler.cumulative[t] = total; ++t; } } if (!(total > 0.0)) { chopper_polygon_sampler_free(&sampler); return sampler; } sampler.count = t; sampler.acceptance = total / sampled_area; for (unsigned i = 0; i < sampler.count; ++i) sampler.cumulative[i] /= total; /* Pin the last, rather than leave a draw above it to fall off the end of the search. */ sampler.cumulative[sampler.count - 1] = 1.0; return sampler; } #pragma acc routine seq void chopper_polygon_sampler_draw(const chopper_polygon_sampler * sampler, const double triangle_deviate, const double first_deviate, const double second_deviate, double * inverse_velocity, double * time) { if (sampler == NULL || sampler->count == 0) return; unsigned low = 0, high = sampler->count - 1; while (low < high) { const unsigned mid = low + (high - low) / 2; if (sampler->cumulative[mid] <= triangle_deviate) low = mid + 1; else high = mid; } /* Two uniform deviates land in the unit square; folding the far half back across the * diagonal puts them uniformly in the unit triangle, and the affine map carries that * to the real one. */ double u = first_deviate, v = second_deviate; if (u + v > 1.0) { u = 1.0 - u; v = 1.0 - v; } if (inverse_velocity != NULL) { *inverse_velocity = sampler->origin[low].inverse_velocity + u * sampler->edge_a[low].inverse_velocity + v * sampler->edge_b[low].inverse_velocity; } if (time != NULL) { *time = sampler->origin[low].time + u * sampler->edge_a[low].time + v * sampler->edge_b[low].time; } } static void chopper_write_axes_to_file(FILE * file, const double * inverse_velocities, const unsigned inverse_velocity_count, const double * times, const unsigned time_count) { if (inverse_velocities && inverse_velocity_count) { fprintf(file, "# Inverse velocity edges (s/m):\n#"); for (unsigned vi = 0; vi < inverse_velocity_count; ++vi) { fprintf(file, "%g ", inverse_velocities[vi]); } fprintf(file, "\n"); } if (times && time_count) { fprintf(file, "# Time edges (s):\n#"); for (unsigned ti = 0; ti < time_count; ++ti) { fprintf(file, "%g ", times[ti]); } fprintf(file, "\n"); } } static FILE * chopper_open_file_for_writing( const char * directory, const char * filename, const char * extension, const char * path_sep ){ const unsigned dlen = directory ? strlen(directory) : 0; const unsigned plen = path_sep ? strlen(path_sep) : 0; const unsigned flen = filename ? strlen(filename) : 0; const unsigned elen = extension ? strlen(extension) : 0; char * filepath = calloc(dlen + plen + flen + elen + 1, sizeof(char)); int dp = 0, fp = 0; if (directory && dlen) { sprintf(filepath, "%s", directory); dp = strcmp(directory + dlen - plen, path_sep); } if (filename && flen) { fp = strcmp(filename, path_sep); } if (dp && fp) { // need to add a path separator between directory and filename sprintf(filepath + strlen(filepath), "%s",path_sep); } if (filename) { sprintf(filepath + strlen(filepath), "%s", filename); } if (elen && filename && extension && strcmp(filename + flen - elen, extension) != 0) { // need to add the extension sprintf(filepath + strlen(filepath), "%s", extension); } /* Truncating, not appending. A caller may write the same grid more than once in a run -- * McStas saves on SIGUSR2 and carries on, then saves again at the end -- and appending * leaves the second copy nose to tail with the first in one file, which reads as a single * grid of twice the rows. */ FILE * file = fopen(filepath, "w"); if (file == NULL) { printf("Could not open file %s for writing\n", filepath); } free(filepath); return file; } int chopper_write_mask_to_file( const char * directory, const char * filename, const char * extension, const char * path_sep, const int * mask, const unsigned inverse_velocity_count, const unsigned time_count, const double * inverse_velocities, const double * times ){ FILE * file = chopper_open_file_for_writing(directory, filename, extension, path_sep); if (file == NULL) { return -1; } fprintf(file, "# Chopper mask file generated by chopper-lib\n"); chopper_write_axes_to_file(file, inverse_velocities, inverse_velocity_count+1, times, time_count+1); fprintf(file, "# Mask (rows: time bins, columns: inverse velocity bins):\n"); for (unsigned ti = 0; ti < time_count; ++ti) { for (unsigned vi = 0; vi < inverse_velocity_count; ++vi) { const unsigned index = ti * inverse_velocity_count + vi; fprintf(file, "%d ", mask[index]); } fprintf(file, "\n"); } fclose(file); return 0; } int chopper_write_polygons_to_file( const char * directory, const char * filename, const char * extension, const char * path_sep, const chopper_polygon_set * set, const chopper_polygon * sampled ) { FILE * file = chopper_open_file_for_writing(directory, filename, extension, path_sep); if (file == NULL) return 0; const double transmitted = chopper_polygon_set_area(set); const double sampled_area = sampled ? chopper_polygon_area(sampled) : 0.0; /* %.17g round-trips a double exactly, which is the point of writing the region rather * than a picture of it: a reader gets the vertices the calculation actually used. */ fprintf(file, "{\n"); fprintf(file, " \"chopper_lib_version\": \"%d.%d.%d\",\n", CHOPPER_LIB_VERSION_MAJOR, CHOPPER_LIB_VERSION_MINOR, CHOPPER_LIB_VERSION_PATCH); fprintf(file, " \"inverse_velocity_unit\": \"s/m\",\n"); fprintf(file, " \"time_unit\": \"s\",\n"); if (sampled && sampled->count >= 3 && sampled_area > 0.0) { double iv_low = 0, iv_high = 0, t_low = 0, t_high = 0; chopper_polygon_extent(sampled, 1.0, 0.0, &iv_low, &iv_high); chopper_polygon_extent(sampled, 0.0, 1.0, &t_low, &t_high); fprintf(file, " \"sampled\": {\"inverse_velocity\": [%.17g, %.17g], " "\"time\": [%.17g, %.17g], \"area\": %.17g},\n", iv_low, iv_high, t_low, t_high, sampled_area); fprintf(file, " \"acceptance\": %.17g,\n", transmitted / sampled_area); } else { fprintf(file, " \"sampled\": null,\n"); fprintf(file, " \"acceptance\": null,\n"); } fprintf(file, " \"transmitted_area\": %.17g,\n", transmitted); range_set bands = chopper_polygon_set_inverse_velocity_ranges(set); fprintf(file, " \"inverse_velocity_bands\": ["); for (unsigned i = 0; i < bands.count; ++i) { fprintf(file, "%s[%.17g, %.17g]", i ? ", " : "", bands.ranges[i].minimum, bands.ranges[i].maximum); } fprintf(file, "],\n"); if (bands.ranges) free(bands.ranges); fprintf(file, " \"polygons\": [\n"); for (unsigned i = 0; set != NULL && i < set->count; ++i) { const chopper_polygon * polygon = &set->polygon[i]; fprintf(file, " {\"area\": %.17g, \"vertices\": [", chopper_polygon_area(polygon)); for (unsigned v = 0; v < polygon->count; ++v) { fprintf(file, "%s[%.17g, %.17g]", v ? ", " : "", polygon->vertex[v].inverse_velocity, polygon->vertex[v].time); } fprintf(file, "]}%s\n", (i + 1 < set->count) ? "," : ""); } fprintf(file, " ]\n}\n"); fclose(file); return 1; } int chopper_write_total_to_file( const char * directory, const char * filename, const char * extension, const char * path_sep, const double * total, const unsigned inverse_velocity_count, const unsigned time_count, const double * inverse_velocities, const double * times ) { FILE * file = chopper_open_file_for_writing(directory, filename, extension, path_sep); if (file == NULL) { return -1; } fprintf(file, "# Chopper mask file generated by chopper-lib\n"); chopper_write_axes_to_file(file, inverse_velocities, inverse_velocity_count + 1, times, time_count + 1); fprintf(file, "# Total signal distribution (rows: time bins, columns: inverse velocity bins):\n"); for (unsigned ti = 0; ti < time_count; ++ti) { for (unsigned vi = 0; vi < inverse_velocity_count; ++vi) { const unsigned index = ti * inverse_velocity_count + vi; fprintf(file, "%g ", total[index]); } fprintf(file, "\n"); } fclose(file); return 0; } #ifdef __cplusplus } // end EXTERN "C" #endif